Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567372: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319795' containing sample 'VET1915R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 774.6M bases, 346.9Mb downloads

UUID: 95d96abb-194c-4efd-a317-57991b7b4226

Design: Illumina sequencing of Staphylococcus aureus VET1915R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228844 • SRP042818 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1915R

SAMN02404334 • SRS626886 • All experiments • All runs

Organism: Staphylococcus aureus VET1915R

Library:

Name: Pond-319795

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470849.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDI4

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55254

research_project: RP-513

root_sample_id: SM-4PO9S

sample_id: SM-5CDI4

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 774.6M bases, 346.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1329241	1,935,925	391.1M	174.8Mb	2014-06-03
SRR1342201	1,898,828	383.6M	172Mb	2014-06-05

ID:: 810189

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